Integrated DNA Technologies

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Dyes

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CategoryExcitationEmission

Freedom Dyes

Dye	Ex.	Em.	Alternative
6-FAM^TM (Fluorescein)	495	520	N/A
MAX (NHS Ester)	524	557	JOE (NHS Ester)
TYE^TM 563	549	563	Cy3^TM
TEX 615	596	613	Texas Red®-X (NHS Ester)
TYE^TM 665	645	665	Cy5^TM
TYE 705	686	704	Cy5.5^TM

Alexa Fluor® Dyes

Dye	Ex.	Em.	Alternative
Alexa Fluor^TM 488 (NHS Ester)	492	517	N/A
Alexa Fluor^TM 532 (NHS Ester)	527	553	N/A
Alexa Fluor^TM 546 (NHS Ester)	555	571	N/A
Alexa Fluor^TM 594 (NHS Ester)	584	616	N/A
Alexa Fluor^TM 647 (NHS Ester)	650	670	N/A
Alexa Fluor^TM 660 (NHS Ester)	661	691	N/A
Alexa Fluor^TM 750 (NHS Ester)	753	775	N/A

CY^TM Dyes

Dye	Ex.	Em.	Alternative
Cy3^TM	550	564	TYE^TM 563
Cy5^TM	648	668	TYE^TM 665
Cy5.5^TM	685	706	TYE 705

Fluorescein Dyes

Dye	Ex.	Em.	Alternative
6-FAM^TM (Azide)	496	516	N/A
6-FAM^TM (NHS Ester)	496	516	N/A
Fluorescein dT	495	520	N/A
JOE (NHS Ester)	529	555	MAX (NHS Ester)
TET^TM	522	539	N/A
HEX^TM	538	555	N/A

LI-COR IRDyes®

Dye	Ex.	Em.	Alternative
5' IRDye® 700	684	702	N/A
5' IRDye® 800	791	809	N/A
5' IRDye® 800CW (NHS Ester)	767	791	N/A

Rhodamine Dyes

Dye	Ex.	Em.	Alternative
Rhodamine Green^TM-X (NHS Ester)	504	531	N/A
TAMRA^TM	559	583	N/A
TAMRA^TM (NHS Ester)	559	583	N/A
Rhodamine Red^TM-X (NHS Ester)	574	594	N/A
ROX^TM (NHS Ester)	588	608	N/A
5-TAMRA ^TM (Azide)	546	579	N/A

WellRED Dyes

Dye	Ex.	Em.	Alternative
WellRED D4 Dye	648	666	N/A
WellRED D3 Dye	683	701	N/A
WellRED D2 Dye	763	778	N/A

Other

Dye	Ex.	Em.	Alternative
Texas Red®-X (NHS Ester)	598	617	TEX 615
Lightcycler® 640 (NHS Ester)	620	635	N/A
Dy 750 (NHS Ester)	747	776	N/A

Dye	Ex.	Em.	Alternative
Alexa Fluor^TM 488 (NHS Ester)	492	517	N/A
6-FAM^TM (Fluorescein)	495	520	N/A
6-FAM^TM (Azide)	496	516	N/A
Rhodamine Green^TM-X (NHS Ester)	504	531	N/A
TET^TM	522	539	N/A
MAX (NHS Ester)	524	557	JOE (NHS Ester)
Alexa Fluor^TM 532 (NHS Ester)	527	553	N/A
JOE (NHS Ester)	529	555	MAX (NHS Ester)
HEX^TM	538	555	N/A
5-TAMRA ^TM (Azide)	546	579	N/A
TYE^TM 563	549	563	Cy3^TM
Cy3^TM	550	564	TYE^TM 563
Alexa Fluor^TM 546 (NHS Ester)	555	571	N/A
TAMRA^TM	559	583	N/A
Rhodamine Red^TM-X (NHS Ester)	574	594	N/A
Alexa Fluor^TM 594 (NHS Ester)	584	616	N/A
ROX^TM (NHS Ester)	588	608	N/A
TEX 615	596	613	Texas Red®-X (NHS Ester)
Texas Red®-X (NHS Ester)	598	617	TEX 615
Lightcycler® 640 (NHS Ester)	620	635	N/A
TYE^TM 665	645	665	Cy5^TM
Cy5^TM	648	668	TYE^TM 665
Alexa Fluor^TM 647 (NHS Ester)	650	670	N/A
Alexa Fluor^TM 660 (NHS Ester)	661	691	N/A
WellRED D3 Dye	683	701	N/A
5' IRDye® 700	684	702	N/A
Cy5.5^TM	685	706	TYE 705
TYE 705	686	704	Cy5.5^TM
Dy 750 (NHS Ester)	747	776	N/A
Alexa Fluor^TM 750 (NHS Ester)	753	775	N/A
WellRED D2 Dye	763	778	N/A
5' IRDye® 800CW (NHS Ester)	767	791	N/A
5' IRDye® 800	791	809	N/A

Dye	Ex.	Em.	Alternative
6-FAM^TM (Azide)	496	516	N/A
Alexa Fluor^TM 488 (NHS Ester)	492	517	N/A
6-FAM^TM (Fluorescein)	495	520	N/A
Rhodamine Green^TM-X (NHS Ester)	504	531	N/A
TET^TM	522	539	N/A
Alexa Fluor^TM 532 (NHS Ester)	527	553	N/A
JOE (NHS Ester)	529	555	MAX (NHS Ester)
MAX (NHS Ester)	524	557	JOE (NHS Ester)
TYE^TM 563	549	563	Cy3^TM
Cy3^TM	550	564	TYE^TM 563
Alexa Fluor^TM 546 (NHS Ester)	555	571	N/A
5-TAMRA ^TM (Azide)	546	579	N/A
TAMRA^TM	559	583	N/A
Rhodamine Red^TM-X (NHS Ester)	574	594	N/A
ROX^TM (NHS Ester)	588	608	N/A
TEX 615	596	613	Texas Red®-X (NHS Ester)
Alexa Fluor^TM 594 (NHS Ester)	584	616	N/A
Texas Red®-X (NHS Ester)	598	617	TEX 615
Lightcycler® 640 (NHS Ester)	620	635	N/A
TYE^TM 665	645	665	Cy5^TM
Cy5^TM	648	668	TYE^TM 665
Alexa Fluor^TM 647 (NHS Ester)	650	670	N/A
Alexa Fluor^TM 660 (NHS Ester)	661	691	N/A
WellRED D3 Dye	683	701	N/A
5' IRDye® 700	684	702	N/A
TYE 705	686	704	Cy5.5^TM
Cy5.5^TM	685	706	TYE 705
Alexa Fluor^TM 750 (NHS Ester)	753	775	N/A
Dy 750 (NHS Ester)	747	776	N/A
WellRED D2 Dye	763	778	N/A
5' IRDye® 800CW (NHS Ester)	767	791	N/A
5' IRDye® 800	791	809	N/A

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